These can induce changes in transcriptomics and metabolomics, resulting in changes to root and leaf exudates and, in turn, altering the plant-associated microbial community.
Abiotic stressors such as drought [Assembly and ecological function of the root microbiome across angiosperm plant species.Insights into plant phosphate sensing and signaling.Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria.Drought stress results in a compartment-specific restructuring of the rice root-associated microbiomes.Assembly and ecological function of the root microbiome across angiosperm plant species.Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria.Rapid responses of soil microorganisms improve plant fitness in novel environments.The relative importance of rapid evolution for plant-microbe interactions depends on ecological context.Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota.Insights into plant phosphate sensing and signaling.Long-distance signaling driven by plant hormones plays a crucial role in the systemic acquired resistance of plants, enabling long-term adaptations to stresses at the whole-plant level [Networking by small-molecule hormones in plant immunity.Steering soil microbiomes to suppress aboveground insect pests.Foliar aphid feeding recruits rhizosphere bacteria and primes plant immunity against pathogenic and non-pathogenic bacteria in pepper.Disease-induced assemblage of a plant-beneficial bacterial consortium.Activation of the jasmonic acid plant defence pathway alters the composition of rhizosphere bacterial communities.Root-secreted malic acid recruits beneficial soil bacteria.Foliar aphid feeding recruits rhizosphere bacteria and primes plant immunity against pathogenic and non-pathogenic bacteria in pepper.Roles of plant volatiles in defence against microbial pathogens and microbial exploitation of volatiles.Bidirectional interaction between phyllospheric microbiotas and plant volatile emissions.Several major mechanisms can lead to increased abundance of particular plant-associated microbes (The stress modulates the leaf/root exudate profile (via biosynthesis, transport, and secretion processes), which consequently attracts particular bacteria and/or fungi [Root exudation of primary metabolites: mechanisms and their roles in plant responses to environmental stimuli.Root-secreted malic acid recruits beneficial soil bacteria.Beneficial microbes increase in abundance to compete for resources and space using bio-weapons such as antimicrobial compounds and quorum-sensing quenching molecules, which inhibit pathogen growth and virulence [Diversity and natural functions of antibiotics produced by beneficial and plant pathogenic bacteria.The ecological role of volatile and soluble secondary metabolites produced by soil bacteria.Bacterial-fungal interactions: hyphens between agricultural, clinical, environmental, and food microbiologists.The co-occurrence of microbes due to nutritional interdependence, especially in nutrient poor conditions [Bacterial-fungal interactions: hyphens between agricultural, clinical, environmental, and food microbiologists.Pathogens or herbivores favor the growth and proliferation of particular microbes [Fungal-bacterial biofilms: their development for novel biotechnological applications.In response to plant stresses, many microorganisms increase in number or proportion. After the uptake, Si accumu Emerging evidence demonstrates that changes, especially the increased abundance of commensal microbes following stresses, can be beneficial for plant survival and act as a legacy, enhancing offspring fitness. A report suggests that >50% of arabidopsis (Build your own soil: exploring microfluidics to create microbial habitat structures.Rhizosphere microbiome structure alters to enable wilt resistance in tomato.Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome.Analysis of the microbiome: advantages of whole genome shotgun versus 16S amplicon sequencing.Interactions and self-organization in the soil-microbe complex.Complex interactions exist between the plant immune system and its microbiome, adding to the capacity and flexibility of plants to cope with heterogeneous environments [Beyond pathogens: microbiota interactions with the plant immune system.Beyond pathogens: microbiota interactions with the plant immune system.Beyond pathogens: microbiota interactions with the plant immune system.Inner plant values: diversity, colonization and benefits from endophytic bacteria.Genomic features of bacterial adaptation to plants.The plant rhizosphere, phyllosphere, and anthosphere act as ‘gatekeepers’ to nonrandomly select soil, air, insect-transferred, and other environmental microbes, resulting in phylogenetic conservation within these microbial niches [Inner plant values: diversity, colonization and benefits from endophytic bacteria.Structure, variation, and assembly of the root-associated microbiomes of rice.Inner plant values: diversity, colonization and benefits from endophytic bacteria.Yeast–bacterium interactions: the next frontier in nectar research.Beyond pathogens: microbiota interactions with the plant immune system.Induced systemic resistance by beneficial microbes.Beyond pathogens: microbiota interactions with the plant immune system.Networking by small-molecule hormones in plant immunity.Induced systemic resistance by beneficial microbes.Linking jasmonic acid signaling, root exudates, and rhizosphere microbiomes.Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa.Salicylic acid and jasmonic acid signaling defense pathways reduce natural bacterial diversity on Upregulation of jasmonate-inducible defense proteins and differential colonization of roots of Activation of the jasmonic acid plant defence pathway alters the composition of rhizosphere bacterial communities.Linking plant nutritional status to plant-microbe interactions.Regulation of enteric endophytic bacterial colonization by plant defenses.Salicylic acid and jasmonic acid signaling defense pathways reduce natural bacterial diversity on Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa.A strong host-specific screening effect is imposed by plants on the rhizosphere microbial biology, resulting in a gradient increase of Gammaproteobacteria (a, pink in the pie charts) and decreases of Gemmatimonadetes, Archaea, and Acidobacteria (b, blue in the pie charts) from the bulk soil to the rhizosphere soil, to the rhizoplane (root surfaces), and to the root endosphere [Inner plant values: diversity, colonization and benefits from endophytic bacteria.Beyond pathogens: microbiota interactions with the plant immune system.Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa.Salicylic acid and jasmonic acid signaling defense pathways reduce natural bacterial diversity on Regulation of enteric endophytic bacterial colonization by plant defenses.Effects of jasmonic acid signalling on the wheat microbiome differ between body sites.The plant innate immune system alone is not always sufficient to deter enemies in the soil or Microbial interkingdom interactions in roots promote Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome.Rhizosphere microbiomes modulated by pre-crops assisted plants in defense against plant-parasitic nematodes.The effect of rhizosphere microbes outweighs host plant genetics in reducing insect herbivory.Native soils with their microbiotas elicit a state of alert in tomato plants.Native soils with their microbiotas elicit a state of alert in tomato plants.Recent studies also show that crops with superior defense and nutrient acquisition also, arguably, have consistent microbial traits in the rhizosphere, suggesting a close link between plant phenotype and root microbiota function [Rhizosphere microbiome structure alters to enable wilt resistance in tomato.NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice.NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice.Rhizosphere microbiome structure alters to enable wilt resistance in tomato.Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota.Root microbiota drive direct integration of phosphate stress and immunity.Plants not only employ environment-derived microbiomes to inhibit pathogens and modulate their immune system, but also can attract beneficial microbes from the environment to cope with particular stresses, coined the ‘cry for help’ strategy [Root exudates drive the soil-borne legacy of aboveground pathogen infection.Rapid responses of soil microorganisms improve plant fitness in novel environments.Foliar aphid feeding recruits rhizosphere bacteria and primes plant immunity against pathogenic and non-pathogenic bacteria in pepper.Wheat microbiome bacteria can reduce virulence of a plant pathogenic fungus by altering histone acetylation.Root exudates of stressed plants stimulate and attract Systemic enrichment of antifungal traits in the rhizosphere microbiome after pathogen attack.Wheat microbiome bacteria can reduce virulence of a plant pathogenic fungus by altering histone acetylation.Rhizosphere microbiome structure alters to enable wilt resistance in tomato.Disease-induced assemblage of a plant-beneficial bacterial consortium.Systemic enrichment of antifungal traits in the rhizosphere microbiome after pathogen attack.Microorganisms respond rapidly to changes in root exudates and other root inputs.
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